SNP Profiles of POUND 2 /A   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCAACCTTTTAATTTTCCCCAAAGCCGG
1._GC-01-093-5-10
CCAACCTTTTAATTTTCCCCAAAGCCGG
2._GC-01-093-5-10
CCAACCTTTTAATTTTCCCCAAAGCCGG
3._GC-01-093-5-10
CCAACCTTTTAATTTTCCCCAAAGCCGG
4._GC-01-093-5-10
CCAACCTTTTAATTTTCCCCAAAGCCGG
5._GC-01-093-5-10
CCAACCTTTTAATTTTCCCCAAAGCCGG
6._GC-01-093-5-10
CCAACCTTTTAATTTTCCCCAAAGCCGG
7._POUND_2_/A
CCAACCTTTTAATTTTCCCCAAAGCCGG
8._POUND_2_/A
CCAACCTTTTAATTTTCCCCAAAGCCGG
9._POUND_2_/A
CCAACCTTTTAATTTTCCCCAAAGCCGG
10._POUND_2_/A
CCAACCTTTTAATTTTCCCCAAAGCCGG
11._POUND_2_/A
CCAACCTTTTAATTTTCCCCAAAGCCGG
12._POUND_2_/A
CCAACCTTTTAATTTTCC__AAAGCCGG
13._POUND_2_/A
CCGGGGCCTT__TTTTCCCCAAGGCCGG
14._GC-01-093-5-10
CCGGGGCCTT__TTTTCCCCAAGGCCGG
15._GC-01-093-5-10
__GGGGCCTT__TTTTCCCCAAGGCCGG
16._POUND_2_/A
__GGGGCCTT__TTTTCCCCAAGGCCGG
17._GC-01-93-5-10
GGAAGGAAAAAAAAAA____AAAGGGGG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTAAGGCCCCGGGGAACCAAGGGGTTCC
1._GC-01-093-5-10
TTAAGGCCCCGGGGAACCAAGGGGTTCC
2._GC-01-093-5-10
TTAAGGCCCCGGGGAACCAAGGGGTTCC
3._GC-01-093-5-10
TTAAGGCCCCGGGGAACCAAGGGGTTCC
4._GC-01-093-5-10
TTAAGGCCCCGGGGAACCAAGGGGTTCC
5._GC-01-093-5-10
TTAAGGCCCCGGGGAACCAAGGGGTTCC
6._GC-01-093-5-10
TTAAGGCCCCGGGGAACCAAGGGGTTCC
7._POUND_2_/A
TTAAGGCCCCGGGGAACCAAGGGGTTCC
8._POUND_2_/A
TTAAGGCCCCGGGGAACCAAGGGGTTCC
9._POUND_2_/A
TTAAGGCCCCGGGGAACCAAGGGGTTCC
10._POUND_2_/A
TTAAGGCCCCGGGGAACCAAGGGGTTCC
11._POUND_2_/A
TTAAGGCCCCGGGGAACCAAGGGGTTCC
12._POUND_2_/A
TTAAGGCCCCGGGGAACCAAGGGGTTCC
13._POUND_2_/A
CCAAGGCCCCGGGGGGCCCCCCGGCCAA
14._GC-01-093-5-10
CCAAGGCCCCGGGGGGCCCCCCGGCCAA
15._GC-01-093-5-10
CCAAGGCCCCGGGGGGCCCCCCGGCCAA
16._POUND_2_/A
CCAAGGCCCCGGGGGGCCCCCCGGCCAA
17._GC-01-93-5-10
AAAAGGGGGGCCCC__GGAAGGCC__CC
 29 30 31 32 33 34 35 36 37 38 39 40   
_Input profile
AAGGAACCAACCAACCGGCCTTGGX_XX_X
1._GC-01-093-5-10
AAGGAACCAACCAACCGGCCTTGGX_XX_X
2._GC-01-093-5-10
AAGGAACCAACCAACCGGCCTTGGX_XX_X
3._GC-01-093-5-10
AAGGAACCAACCAACCGGCCTTGGX_XX_X
4._GC-01-093-5-10
AAGGAACCAACCAACCGGCCTTGGX_XX_X
5._GC-01-093-5-10
AAGGAACCAACCAACCGGCCTTGGX_XX_X
6._GC-01-093-5-10
AAGGAACCAACCAACCGGCCTTGGX_XX_X
7._POUND_2_/A
AAGGAACCAACCAACCGGCCTTGGX_XX_X
8._POUND_2_/A
AAGGAACCAACCAACCGGCCTTGGX_XX_X
9._POUND_2_/A
AAGGAACCAACCAACCGGCCTTGGX_XX_X
10._POUND_2_/A
AAGGAACCAACCAACCGGCCTTGGX_XX_X
11._POUND_2_/A
AAGGAACCAACCAACCGGCCTTGGX_XX_X
12._POUND_2_/A
AAGGAACCAA__AACCGGCCTTGGX_XX_X
13._POUND_2_/A
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
14._GC-01-093-5-10
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
15._GC-01-093-5-10
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
16._POUND_2_/A
GGGGAACCGGCCAATTTTAAAAGGX_XX_X
17._GC-01-93-5-10
__GGAAGGAAGGAAGGCCCCTTGGX_XX_X

Input profile: POUND_2_/A

 
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Mars Center for Cocoa Science, Brazil
Location: 1510 9 > FP
 Dapeng Zhang, 2016

1._POUND_2_/A GC-01-093-5-10

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

2._POUND_2_/A GC-01-093-5-10

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9 > FP1
 Mars, 2018

3._POUND_2_/A GC-01-093-5-10

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7 > FP3
 Mars, 2018

4._POUND_2_/A GC-01-093-5-10

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP2
 Mars, 2018

5._POUND_2_/A GC-01-093-5-10

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

6._POUND_2_/A GC-01-093-5-10

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

7._POUND_2_/A

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1510 7 > FP
 Dapeng Zhang, 2016

8._POUND_2_/A

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1510 4 > FP
 Dapeng Zhang, 2016

9._POUND_2_/A

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1510 11
 Dapeng Zhang, 2016

10._POUND_2_/A

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1510 2
 Dapeng Zhang, 2016

11._POUND_2_/A

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1510 1
 Dapeng Zhang, 2016

12._POUND_2_/A

identical
38 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B A75 T3
 Dapeng Zhang, 2016

13._POUND_2_/A

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1510 13
 Dapeng Zhang, 2016

14._POUND_2_/A GC-01-093-5-10

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

15._POUND_2_/A GC-01-093-5-10

59.2 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5 > FP4
 Mars, 2018

16._POUND_2_/A

59.2 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1510 5 > FP
 Dapeng Zhang, 2016

17._POUND_2_/A GC-01-93-5-10

48.6 %
35 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 10, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25